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  • 1-10 ل  10 نتائج ل ""Sequence Alignment""

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Collection : Ecole Des Ponts Paristech
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CREMSA: Compressed indexing of (ultra) large alignments

Subjects: Indexing; Multiple sequence alignment; Compression

  • Source: https://hal.science/hal-04910677 ; 2025.

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Academic Journal

Regular expression constrained sequence alignment revisited

Subjects: [INFO.INFO-BI]Computer Science [cs]/Bioinformatics [q-bio.QM]; [SDV.BIBS]Life Sciences [q-bio]/Quantitative Methods [q-bio.QM]; [INFO.INFO-DS]Computer Science [cs]/Data Structures and Algorithms [cs.DS]

  • Source: ISSN: 1066-5277.

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Conference

Re-Use Dynamic Programming for Sequence Alignment: An Algorithmic Toolkit

Subjects: [INFO.INFO-DS]Computer Science [cs]/Data Structures and Algorithms [cs.DS]

  • Source: String Algorithmics ; https://hal.science/hal-00619995 ; String Algorithmics, 2005, United Kingdom. pp.19-59

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Conference

A Sub-quadratic Sequence Alignment Algorithm for Unrestricted Cost Matrices

Subjects: [INFO.INFO-DS]Computer Science [cs]/Data Structures and Algorithms [cs.DS]

  • Source: Proceedings of the Thirteen Annual ACM-SIAM Symposium on Discrete Algorithms ; https://hal.science/hal-00619996 ; Proceedings of the Thirteen Annual ACM-SIAM Symposium on Discrete Algorithms, 2002,

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A Subquadratic Sequence Alignment Algorithm for Unrestricted Scoring Matrices

Subjects: alignment; dynamic programming; text compression

  • Source: ISSN: 0097-5397 ; SIAM Journal on Computing ; https://hal.science/hal-00619573 ; SIAM Journal on Computing, 2003, 32 (6), pp.1654-1673. ⟨10.1137/S0097539702402007⟩.

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Academic Journal

Tree Diet: Reducing the Treewidth to Unlock FPT Algorithms in RNA Bioinformatics

Subjects: RNA design; tree decomposition; treewidth

  • Source: ISSN: 1748-7188 ; Algorithms for Molecular Biology ; https://hal.science/hal-03608412 ; Algorithms for Molecular Biology, 2022, 17 (1), pp.8. ⟨10.1186/s13015-022-00213-z⟩ ;

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Tree Diet: Reducing the Treewidth to Unlock FPT Algorithms in RNA Bioinformatics

Subjects: RNA; Treewidth; FPT algorithmsParis; France

  • Source: WABI 2021 - 21st Workshop on Algorithms in Bioinformatics ; https://inria.hal.science/hal-03206132 ; WABI 2021 - 21st Workshop on Algorithms in Bioinformatics, 2021, Paris, France ;

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An FPT-Algorithm for Longest Common Subsequence Parameterized by the Number of Deletions

Subjects: NP-hard string problems; multiple sequence alignment; parameterized complexity

  • Source: https://hal.science/hal-03322887 ; 2021.

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An FPT-Algorithm for Longest Common Subsequence Parameterized by the Maximum Number of Deletions

Subjects: [INFO]Computer Science [cs]Pragues (CZ); Czech Republic

  • Source: Leibniz International Proceedings in Informatics (LIPIcs) ; 33rd Annual Symposium on Combinatorial Pattern Matching (CPM 2022) ; https://hal.science/hal-03852740 ; 33rd Annual Symposium on

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Cutting an alignment with Ockham's razor

Subjects: Homoplasy; Recombination breakpoints; Parsimony

  • Source: https://hal-lirmm.ccsd.cnrs.fr/lirmm-02413025 ; 2019.

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  • 1-10 ل  10 نتائج ل ""Sequence Alignment""