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OXBench:a benchmark for evaluation of protein multiple sequence alignment accuracy

• Authors : Raghava, G. P. S.; Searle, Stephen M. J.; Audley, Patrick C.

Subjects: Amino acid sequence; Benchmarking; Cluster analysis

• Source: Raghava , G P S , Searle , S M J , Audley , P C , Barber , J D & Barton , G J 2003 , ' OXBench : a benchmark for evaluation of protein multiple sequence

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Alignment of Biological Sequences with Jalview

• Authors : Procter, James B.; Carstairs, G. Mungo; Soares, Ben ...

Subjects: Multiple sequence alignment visualization; Interactive analysis; Web application

• Source: Procter, J B, Carstairs, G M, Soares, B, Mourão, K, Ofoegbu, T C, Barton, D, Lui, L, Menard, A, Sherstnev, N, Roldan-Martinez, D, Duce, S, Martin, D M A & Barton, G J 2021,

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Sensitive inference of alignment-safe intervals from biodiverse protein sequence clusters using EMERALD

• Authors : Grigorjew, Andreas; Gynter, Artur; Dias, Fernando H. C

Subjects: Dynamic programming; Needleman-Wunsch algorithm; Protein folding

• Source: Grigorjew , A , Gynter , A , Dias , F H C , Buchfink , B , Drost , H-G & Tomescu , A I 2023 , ' Sensitive inference of alignment-safe intervals from biodiverse protein

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The adenomatous polyposis coli protein 30 years on

• Authors : Abbott, James; Nathke, Inke S.

Subjects: Adenomatous Polyposis Coli; Sequence alignment; Disordered regions

• Source: Abbott, J & Nathke, I S 2023, 'The adenomatous polyposis coli protein 30 years on', Seminars in Cell & Developmental Biology, vol. 150-151, pp. 28-34. https://doi.org/10.1016/j.semcdb.2023.04.004

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Structural insights into substrate recognition by the SOCS2 E3 ubiquitin ligase

• Authors : Kung, Wei-Wei; Ramachandran, Sarath; Makukhin, Nikolai

Subjects: Crystallography; X-Ray; Humans

• Source: Kung , W-W , Ramachandran , S , Makukhin , N , Bruno , E & Ciulli , A 2019 , ' Structural insights into substrate recognition by the SOCS2 E3 ubiquitin ligase ' , Nature Communications , vol. 10 , no.

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Development of phospho-specific Rab protein antibodies to monitor in vivo activity of the LRRK2 Parkinson’s disease kinase

• Authors : Lis, Pawel; Burel, Sophie; Steger, Martin

Subjects: Amino Acid Sequence; Animals; Antibodies

• Source: Lis , P , Burel , S , Steger , M , Mann , M , Brown , F , Diez , F , Tonelli , F , Holton , J L , Winglok Ho , P , Ho , S-L , Chou , M-Y , Polinski , N K , Martinez , T N , Davies , P & Alessi , D R

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Crystal structures of IspF from Plasmodium falciparum and Burkholderia cenocepacia :comparisons inform antimicrobial drug target assessment

• Authors : O'Rourke, Patrick E. F.; Kalinowska-Tłuścik, Justyna; Fyfe, Paul K.

Subjects: Amino Acid Sequence; Burkholderia cenocepacia; Catalytic Domain

• Source: O'Rourke , P E F , Kalinowska-Tłuścik , J , Fyfe , P K , Dawson , A & Hunter , W N 2014 , ' Crystal structures of IspF from Plasmodium falciparum and Burkholderia cenocepacia : comparisons inform

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Quantification of the variation in percentage identity for protein sequence alignments

• Authors : Raghava, G P S; Barton, Geoffrey J

Subjects: Algorithms; Amino Acid Sequence; Computational Biology

• Source: Raghava , G P S & Barton , G J 2006 , ' Quantification of the variation in percentage identity for protein sequence alignments ' , BMC Bioinformatics , vol. 7 , pp. 415

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ARIES:A General Benchmark for Argument Relation Identification

• Authors : Gemechu, Debela; Ruiz-Dolz, Ramon; Reed, Chris ...

Subjects: /dk/atira/pure/subjectarea/asjc/1200/1203; name=Language and Linguistics; /dk/atira/pure/subjectarea/asjc/1700/1712

• Source: Gemechu, D, Ruiz-Dolz, R & Reed, C 2024, ARIES : A General Benchmark for Argument Relation Identification. in Y Ajjour, R Bar-Haim, R El Baff, Z Liu & G Skitalinskaya (eds), Proceedings of the 11th

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A unified approach to evolutionary conservation and population constraint in protein domains highlights structural features and pathogenic sites

• Authors : MacGowan, Stuart A.; Madeira, Fábio; Britto-Borges, Thiago

• Source: MacGowan , S A , Madeira , F , Britto-Borges , T & Barton , G J 2023 ' A unified approach to evolutionary conservation and population constraint in protein domains highlights structural features and

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