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HIVBrainSeqDB: A Database of Annotated HIV Envelope Sequences from Brain and Other Anatomical Sites

• Authors : Holman, Alexander G; Mefford, Megan E.; O'Connor, Niall

• Source: Holman, Alexander G., Megan E. Mefford, Niall O'Connor, and Dana Gabuzda. 2010. HIVBrainSeqDB: A database of annotated HIV envelope

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Principles of Machine Learning-Guided Protein Engineering

• Authors : Biswas, Surojit;

Subjects: machine learning; protein engineering; synthetic biology

• Source: Biswas, Surojit. 2020. Principles of Machine Learning-Guided Protein Engineering. Doctoral dissertation, Harvard University, Graduate School of Arts & Sciences.

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An Extended Nomenclature for Mammalian V-ATPase Subunit Genes and Splice Variants

• Authors : Miranda, Kevin C.; Karet, Fiona E.; Ruttenberg, Alan

Subjects: molecular biology; computational biology; cell biology

• Source: Miranda, Kevin C., Fiona E. Karet, and Dennis Brown. 2010. An Extended Nomenclature for Mammalian V-ATPase Subunit Genes and Splice Variants. PLoS ONE 5(3).

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Genomic Organization and Single-Nucleotide Polymorphism Map of Desmuslin, a Novel Intermediate Filament Protein on Chromosome 15q26.3

• Authors : Mizuno, Yuji; Puca, Annibale A; O'Brien, Kristine F

• Source: Mizuno, Yuji, Annibale A. Puca, Kristine F. O'Brien, Alan H. Beggs, and Louis M. Kunkel. 2001. Genomic organization and single-nucleotide polymorphism map of desmuslin, a novel intermediate filament

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PepBank - A Database of Peptides Based on Sequence Text Mining and Public Peptide Data Sources

• Authors : Shtatland, Timur; Guettler, Daniel; Kossodo, Misha

• Source: Shtatland, Timur, Daniel Guettler, Misha Kossodo, Misha Pivovarov, and Ralph Weissleder. 2007. PepBank - a database of peptides based on

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MAGIC-SPP: A Database-Driven DNA Sequence Processing Package with Associated Management Tools

• Authors : Liang, Chun; Sun, Feng; Wang, Haiming

• Source: Liang, Chun, Feng Sun, Haiming Wang, Junfeng Qu, Robert M. Freeman, Lee H. Pratt, and Marie-Michèle Cordonnier-Pratt. 2006. MAGIC-SPP: A database-driven DNA

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Sequence-specific thermodynamic properties of nucleic acids influence both transcriptional pausing and backtracking in yeast

• Authors : Lukačišin, Martin; Landon, Matthieu; Jajoo, Rishi

Subjects: Biology and life sciences; Molecular biology; Molecular biology techniques

• Source: Lukačišin, Martin, Matthieu Landon, and Rishi Jajoo. 2017. “Sequence-specific thermodynamic properties of nucleic acids influence both transcriptional pausing and

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Maximum Mismatch between Six-Residue Sequences of SARS-CoV-2 Spike Proteins and Human Proteome

• Authors : TOWHIDLOU, MOHAMMADALI;

Subjects: Bioengineering; Nanotechnology

• Source: TOWHIDLOU, MOHAMMADALI. 2023. Maximum Mismatch between Six-Residue Sequences of SARS-CoV-2 Spike Proteins and Human Proteome. Master's thesis, Harvard University

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Population-specific design of de-immunized protein biotherapeutics

• Authors : Schubert, Benjamin; Marks, Debora; Schärfe, Charlotta

Subjects: Biology and Life Sciences; Physiology; Immune Physiology

• Source: Schubert, Benjamin, Charlotta Schärfe, Pierre Dönnes, Thomas Hopf, Debora Marks, and Oliver Kohlbacher. 2018. “Population-specific design of de-immunized protein biotherapeutics.” PLoS

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ViroFind: A novel target-enrichment deep-sequencing platform reveals a complex JC virus population in the brain of PML patients

• Authors : Chalkias, Spyros; Mazaika, Erica; Dang, Xin

Subjects: Biology and life sciences; Organisms; Viruses

• Source: Chalkias, Spyros, Joshua M. Gorham, Erica Mazaika, Michael Parfenov, Xin Dang, Steve DePalma, David McKean, Christine E. Seidman, Jonathan G. Seidman, and Igor J. Koralnik. 2018. “ViroFind: A novel

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