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Evolutionary and structural perspectives of plant cyclic nucleotide-gated cation channels

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  • معلومة اضافية
    • Contributors:
      King Abdullah University of Science and Technology (KAUST); Biological and Environmental Sciences and Engineering (BESE) Division; Bioscience Program; Computational Bioscience Research Center (CBRC); Molecular Signalling Group; Agricultural Biotechnology Laboratory, Department of Plant Science, University of Connecticut, Storrs, CT, United States
    • بيانات النشر:
      Frontiers Media SA
    • الموضوع:
      2012
    • Collection:
      King Abdullah University of Science and Technology: KAUST Repository
    • نبذة مختصرة :
      Ligand-gated cation channels are a frequent component of signaling cascades in eukaryotes. Eukaryotes contain numerous diverse gene families encoding ion channels, some of which are shared and some of which are unique to particular kingdoms. Among the many different types are cyclic nucleotide-gated channels (CNGCs). CNGCs are cation channels with varying degrees of ion conduction selectivity. They are implicated in numerous signaling pathways and permit diffusion of divalent and monovalent cations, including Ca2+ and K+. CNGCs are present in both plant and animal cells, typically in the plasma membrane; recent studies have also documented their presence in prokaryotes. All eukaryote CNGC polypeptides have a cyclic nucleotide-binding domain and a calmodulin binding domain as well as a six transmembrane/one pore tertiary structure. This review summarizes existing knowledge about the functional domains present in these cation-conducting channels, and considers the evidence indicating that plant and animal CNGCs evolved separately. Additionally, an amino acid motif that is only found in the phosphate binding cassette and hinge regions of plant CNGCs, and is present in all experimentally confirmed CNGCs but no other channels was identified. This CNGC-specific amino acid motif provides an additional diagnostic tool to identify plant CNGCs, and can increase confidence in the annotation of open reading frames in newly sequenced genomes as putative CNGCs. Conversely, the absence of the motif in some plant sequences currently identified as probable CNGCs may suggest that they are misannotated or protein fragments. 2012 Zelman, Dawe, Gehring and Berkowitz.
    • File Description:
      application/pdf
    • ISSN:
      1664462X
    • Relation:
      Zelman AK, Dawe A, Gehring C, Berkowitz GA (2012) Evolutionary and Structural Perspectives of Plant Cyclic Nucleotide-Gated Cation Channels. Frontiers in Plant Science 3. doi:10.3389/fpls.2012.00095.; Frontiers in Plant Science; PMC3362136; http://hdl.handle.net/10754/325353
    • الرقم المعرف:
      10.3389/fpls.2012.00095
    • الدخول الالكتروني :
      http://hdl.handle.net/10754/325353
      https://doi.org/10.3389/fpls.2012.00095
    • Rights:
      Copyright © 2012 Zelman, Dawe, Gehring and Berkowitz. ; http://www.frontiersin.org/licenseagreement ; This is an open-access article distributed under the terms of the Creative Commons Attribution Non Commercial License, which permits non-commercial use, distribution, and reproduction in other forums, provided the original authors and source are credited. ; Archived with thanks to Frontiers in Plant Science
    • الرقم المعرف:
      edsbas.A5FF10C4