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Continuous Circulation of Yellow Fever among Rural Populations in the Central African Republic

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  • معلومة اضافية
    • Contributors:
      Centre for Research in Infectious Diseases Yaoundé (CRID); Hub Bioinformatique et Biostatistique - Bioinformatics and Biostatistics HUB; Institut Pasteur Paris (IP)-Université Paris Cité (UPCité); Institut Pasteur de Bangui; Réseau International des Instituts Pasteur (RIIP); Centre de Santé de Mboki; Hôpital de l'Amitié Bangui; Ministry of Health Bangui; Institut Pasteur de Shanghai, Académie des Sciences de Chine - Chinese Academy of Sciences (IPS-CAS); Cellule d'Intervention Biologique d'Urgence (Centre National de Référence) - Laboratory for Urgent Response to Biological Threats (National Reference Center) (CIBU); Environnement et Risques infectieux - Environment and Infectious Risks (ERI); Institut Pasteur Paris (IP)-Institut Pasteur Paris (IP); This research was funded by the World Organisation for Animal Health (OIE) through the European Union (capacity building and surveillance for Ebola virus disease; EBO-SURSY, project reference: FOOD/2016/379-660), the Chinese Academy of Sciences, a Shanghai Municipal Science and Technology Major Project (grant No. 2019SHZDZX02), and by the Ministry of Science and Technology of China (grant No. 2022YFE0114700).
    • بيانات النشر:
      HAL CCSD
      MDPI
    • الموضوع:
      2022
    • Collection:
      Archive ouverte HAL (Hyper Article en Ligne, CCSD - Centre pour la Communication Scientifique Directe)
    • نبذة مختصرة :
      International audience ; Yellow fever remains a public-health threat in remote regions of Africa. Here, we report the identification and genetic characterisation of one yellow-fever case observed during the investigation of a cluster of nine suspected haemorrhagic fever cases in a village in the Central African Republic. Samples were tested using real-time RT-PCR targeting the main African haemorrhagic fever viruses. Following negative results, we attempted virus isolation on VERO E6 cells and newborn mice and rescreened the samples using rRT-PCR. The whole viral genome was sequenced using an Illumina NovaSeq 6000 sequencer. Yellow-fever virus (YFV) was isolated from one woman who reported farming activities in a forest setting several days before disease onset. Phylogenetic analysis shows that this strain belongs to the East-Central African YFV genotype, with an estimated emergence some 63 years ago. Finally, five unique amino-acid changes are present in the capsid, envelop, NS1A, NS3, and NS4B proteins. More efforts are required to control yellow-fever re-emergence in resource-limited settings.
    • Relation:
      info:eu-repo/semantics/altIdentifier/pmid/36146820; pasteur-04128110; https://pasteur.hal.science/pasteur-04128110; https://pasteur.hal.science/pasteur-04128110/document; https://pasteur.hal.science/pasteur-04128110/file/SimoHuguette2022.pdf; PUBMED: 36146820; PUBMEDCENTRAL: PMC9503741
    • الرقم المعرف:
      10.3390/v14092014
    • Rights:
      http://creativecommons.org/licenses/by/ ; info:eu-repo/semantics/OpenAccess
    • الرقم المعرف:
      edsbas.A52C78DD