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Demography and Intercontinental Spread of the USA300 Community-Acquired Methicillin-Resistant Staphylococcus aureus Lineage.

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  • معلومة اضافية
    • Contributors:
      Biologie des Bactéries pathogènes à Gram-positif; Institut Pasteur Paris (IP)-Centre National de la Recherche Scientifique (CNRS); Pathogénie des Staphylocoques – Staphylococcal Pathogenesis CIRI (StaPath); Centre International de Recherche en Infectiologie (CIRI); École normale supérieure de Lyon (ENS de Lyon)-Université Claude Bernard Lyon 1 (UCBL); Université de Lyon-Université de Lyon-Université Jean Monnet - Saint-Étienne (UJM)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS)-École normale supérieure de Lyon (ENS de Lyon)-Université Claude Bernard Lyon 1 (UCBL); Université de Lyon-Université de Lyon-Université Jean Monnet - Saint-Étienne (UJM)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS); Centre National de Reference des Staphylocoques; Université de Lyon; Centre de Bioinformatique, Biostatistique et Biologie Intégrative (C3BI); Institut de Systématique, Evolution, Biodiversité (ISYEB ); Muséum national d'Histoire naturelle (MNHN)-École Pratique des Hautes Études (EPHE); Université Paris Sciences et Lettres (PSL)-Université Paris Sciences et Lettres (PSL)-Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS)-Université des Antilles (UA); Génomique (Plate-Forme) - Genomics Platform; Institut Pasteur Paris (IP); Biostatistique, Biomathématique, Pharmacoépidémiologie et Maladies Infectieuses (B2PHI); Université de Versailles Saint-Quentin-en-Yvelines (UVSQ)-Institut Pasteur Paris (IP)-Institut National de la Santé et de la Recherche Médicale (INSERM); Muséum national d'Histoire naturelle (MNHN)-Université Pierre et Marie Curie - Paris 6 (UPMC)-École Pratique des Hautes Études (EPHE); Université Paris Sciences et Lettres (PSL)-Université Paris Sciences et Lettres (PSL)-Centre National de la Recherche Scientifique (CNRS); Infrastructure d’Avenir France Genomique provided funding to PhilippeGlaser under grant number ANR10-IBNS-09-08. Institut de Veille Sanitaire provided funding to François Vandenesch. Fondation pour la Recherche Médicale (FRM) provided funding to Patricia Martins Simõesunder grant number ING20111223510.; ANR-10-INBS-0009,France Génomique,Organisation et montée en puissance d'une Infrastructure Nationale de Génomique(2010)
    • بيانات النشر:
      HAL CCSD
      American Society for Microbiology
    • الموضوع:
      2016
    • Collection:
      Université de Lyon: HAL
    • نبذة مختصرة :
      International audience ; Community-acquired methicillin-resistant Staphylococcus aureus (CA-MRSA) was recognized worldwide during the 1990s; in less than a decade, several genetically distinct CA-MRSA lineages carrying Panton-Valentine leukocidin genes have emerged on every continent. Most notably, in the United States, the sequence type 18-IV (ST8-IV) clone known as USA300 has become highly prevalent, outcompeting methicillin-susceptible S. aureus (MSSA) and other MRSA strains in both community and hospital settings. CA-MRSA bacteria are much less prevalent in Europe, where the European ST80-IV European CA-MRSA clone, USA300 CA-MRSA strains, and other lineages, such as ST22-IV, coexist. The question that arises is whether the USA300 CA-MRSA present in Europe (i) was imported once or on very few occasions, followed by a broad geographic spread, anticipating an increased prevalence in the future, or (ii) derived from multiple importations with limited spreading success. In the present study, we applied whole-genome sequencing to a collection of French USA300 CA-MRSA strains responsible for sporadic cases and micro-outbreaks over the past decade and United States ST8 MSSA and MRSA isolates. Genome-wide phylogenetic analysis demonstrated that the population structure of the French isolates is the product of multiple introductions dating back to the onset of the USA300 CA-MRSA clone in North America. Coalescent-based demography of the USA300 lineage shows that a strong expansion occurred during the 1990s concomitant with the acquisition of the arginine catabolic mobile element and antibiotic resistance, followed by a sharp decline initiated around 2008, reminiscent of the rise-and-fall pattern previously observed in the ST80 lineage. A future expansion of the USA300 lineage in Europe is therefore very unlikely. To trace the origin, evolution, and dissemination pattern of the USA300 CA-MRSA clone in France, we sequenced a collection of strains of this lineage from cases reported in France in the last decade and ...
    • Relation:
      info:eu-repo/semantics/altIdentifier/pmid/26884428; hal-01312831; https://hal.sorbonne-universite.fr/hal-01312831; https://hal.sorbonne-universite.fr/hal-01312831/document; https://hal.sorbonne-universite.fr/hal-01312831/file/mBio-2016-Glaser-.pdf; PUBMED: 26884428; PUBMEDCENTRAL: PMC4752609
    • الرقم المعرف:
      10.1128/mBio.02183-15
    • الدخول الالكتروني :
      https://doi.org/10.1128/mBio.02183-15
      https://hal.sorbonne-universite.fr/hal-01312831
      https://hal.sorbonne-universite.fr/hal-01312831/document
      https://hal.sorbonne-universite.fr/hal-01312831/file/mBio-2016-Glaser-.pdf
    • Rights:
      http://creativecommons.org/licenses/by-sa/ ; info:eu-repo/semantics/OpenAccess
    • الرقم المعرف:
      edsbas.7178F7A3