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Metadata standards and practical guidelines for specimen and DNA curation when building barcode reference libraries for aquatic life

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اقرأ أكثر حفظ في قائمتي
  • معلومة اضافية
    • Contributors:
      Centre Alpin de Recherche sur les Réseaux Trophiques et Ecosystèmes Limniques (CARRTEL); Université Savoie Mont Blanc (USMB Université de Savoie Université de Chambéry )-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Observatoire des Sciences de l'Univers de Grenoble (Fédération OSUG); King Abdullah University of Science and Technology Saudi Arabia (KAUST); Basque Research and Technology Alliance (BRTA); King Abdulaziz University; Ecosystèmes aquatiques et changements globaux (UR EABX); Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE); Slovak Academy of Science Bratislava (SAS); West Pomeranian University of Technology in Szczecin (ZUT); Universidade do Minho = University of Minho Braga; Swiss Centre for Applied Ecotoxicology (Ecotox Center); Ecole Polytechnique Fédérale de Lausanne (EPFL); Universitat Duisberg-Essen; Université de Genève = University of Geneva (UNIGE); Freie Universität Berlin; Swedish University of Agricultural Sciences = Sveriges lantbruksuniversitet (SLU); Collection des Cyanobactéries; Institut Pasteur Paris (IP); Mer, molécules et santé EA 2160 (MMS); Le Mans Université (UM)-Université de Nantes - UFR des Sciences et des Techniques (UN UFR ST); Université de Nantes (UN)-Université de Nantes (UN)-Université de Nantes - UFR des Sciences Pharmaceutiques et Biologiques; Université de Nantes (UN)-Université de Nantes (UN); Meise Botanic Garden Belgium (Plantentuin); Institute of Agrifood Research and Technology Sant Carles de la Ràpita (IRTA); Institut de Recerca i Tecnologia Agroalimentàries = Institute of Agrifood Research and Technology (IRTA); Royal Botanic Garden Edinburgh; Unité Expérimentale d'Ecologie et d'Ecotoxicologie Aquatique - U3E (Rennes, France) (U3E); Polska Akademia Nauk = Polish Academy of Sciences = Académie polonaise des sciences (PAN); ID-Gene ecodiagnostics Geneva; Institut de Systématique, Evolution, Biodiversité (ISYEB); Muséum national d'Histoire naturelle (MNHN)-École Pratique des Hautes Études (EPHE); Université Paris Sciences et Lettres (PSL)-Université Paris Sciences et Lettres (PSL)-Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS)-Université des Antilles (UA); Laboratoire de Planétologie et Géodynamique UMR 6112 (LPG); Université d'Angers (UA)-Université de Nantes - UFR des Sciences et des Techniques (UN UFR ST); Université de Nantes (UN)-Université de Nantes (UN)-Institut national des sciences de l'Univers (INSU - CNRS)-Centre National de la Recherche Scientifique (CNRS); SCIMABIO Interface SAS; Musée National d'Histoire Naturelle de Luxembourg (MNHN Luxembourg); Norwegian University of Science and Technology Trondheim (NTNU); Norwegian University of Science and Technology (NTNU); This paper was written under COST Action DNAqua-Net. The European COST Action DNAqua-Net (CA 15219 collaborative network which gathers several hundreds of scientists and water managers, with the objective of developing new genetic tools for bioassessment and monitoring of aquatic ecosystems (Leese 2016).; European Project
    • بيانات النشر:
      CCSD
      Pensoft Publishers
    • الموضوع:
      2021
    • Collection:
      Université Savoie Mont Blanc: HAL
    • نبذة مختصرة :
      International audience ; DNA barcoding and metabarcoding is increasingly used to effectively and precisely assess and monitor biodiversity in aquatic ecosystems. As these methods rely on data availability and quality of barcode reference libraries, it is important to develop and follow best practices to ensure optimal quality and traceability of the metadata associated with the reference barcodes used for identification. Sufficient metadata, as well as vouchers, corresponding to each reference barcode must be available to ensure reliable barcode library curation and, thereby, provide trustworthy baselines for downstream molecular species identification. This document (1) specifies the data and metadata required to ensure the relevance, the accessibility and traceability of DNA barcodes and (2) specifies the recommendations for DNA harvesting and for the storage of both voucher specimens/samples and barcode data.
    • الرقم المعرف:
      10.3897/mbmg.5.58056
    • الدخول الالكتروني :
      https://pasteur.hal.science/pasteur-03159791
      https://pasteur.hal.science/pasteur-03159791v1/document
      https://pasteur.hal.science/pasteur-03159791v1/file/MBMG_article_58056_en_1.pdf
      https://doi.org/10.3897/mbmg.5.58056
    • Rights:
      http://creativecommons.org/licenses/by/ ; info:eu-repo/semantics/OpenAccess
    • الرقم المعرف:
      edsbas.32541F8C